Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.6□□□□□ -1.51
GABPAQ06546 RN7SL652P-201ENST00000577769 300 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 AL023583.1-201ENST00000607518 1143 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GABPAQ06546 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC093671.1-201ENST00000624981 2929 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
GABPAQ06546 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 MIR129-1-201ENST00000384972 72 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC007738.1-201ENST00000413892 348 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC016712.1-201ENST00000431088 378 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 BTF3P6-201ENST00000448054 499 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AC093166.2-201ENST00000455969 1017 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AC245028.2-201ENST00000458673 253 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 RPL36AP41-201ENST00000493820 306 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AK3P4-201ENST00000504283 583 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.59□□□□□ -1.51
GABPAQ06546 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.59□□□□□ -1.51
GABPAQ06546 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 SNORD116-30-201ENST00000516468 85 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 FKBP1BP1-201ENST00000553366 325 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.59□□□□□ -1.51
GABPAQ06546 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 SNORA35B-201ENST00000607417 129 ntBASIC5.59□□□□□ -1.51
GABPAQ06546 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.59□□□□□ -1.51
GABPAQ06546 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
GABPAQ06546 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GABPAQ06546 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GABPAQ06546 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
GABPAQ06546 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
GABPAQ06546 KARSP3-201ENST00000571212 1504 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GABPAQ06546 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GABPAQ06546 NPM1P37-201ENST00000403105 874 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 AL591848.1-201ENST00000413092 322 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 RPEP3-201ENST00000425462 676 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 DNAJC19P7-201ENST00000428811 344 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 snoU13.1-201ENST00000459157 104 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 RN7SL481P-201ENST00000477764 299 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.58□□□□□ -1.52
GABPAQ06546 AC034205.1-201ENST00000520621 638 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.58□□□□□ -1.52
GABPAQ06546 MIR4715-201ENST00000584117 79 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 AC020915.5-201ENST00000596836 964 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.58□□□□□ -1.52
GABPAQ06546 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.58□□□□□ -1.52
GABPAQ06546 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GABPAQ06546 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.58□□□□□ -1.52
GABPAQ06546 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GABPAQ06546 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GABPAQ06546 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GABPAQ06546 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GABPAQ06546 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GABPAQ06546 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 CDY11P-201ENST00000447168 1651 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 MAPK10-304ENST00000641341 3984 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC006065.1-201ENST00000422539 802 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC090602.1-201ENST00000469695 252 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 TRBV8-1-201ENST00000481590 279 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.57□□□□□ -1.52
GABPAQ06546 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms