Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AL121578.1-201ENST00000428051 892 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 BRWD1P3-201ENST00000428816 390 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 snoU13.20-201ENST00000459180 104 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 OR9N1P-201ENST00000491296 333 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AC020910.3-201ENST00000603701 874 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 AL021707.7-201ENST00000607991 416 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 AC007497.1-201ENST00000610421 561 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 NEAT1-202ENST00000501122 22743 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS1Q01581 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 RN7SKP95-201ENST00000362860 303 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AL589647.1-201ENST00000402485 466 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC233289.1-201ENST00000403700 508 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AL080315.1-201ENST00000406055 466 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 RN7SKP125-201ENST00000410481 302 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 TCP1P3-201ENST00000414406 1498 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 CHEK2P3-201ENST00000416118 248 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 LINC00993-201ENST00000420453 540 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AL645608.4-201ENST00000423619 154 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 NPM1P22-201ENST00000427761 952 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 RBMY2QP-201ENST00000429799 1147 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 DHX9P1-201ENST00000436565 3076 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 PSMD10P3-201ENST00000437000 448 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC234781.3-201ENST00000452540 973 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AL445433.1-201ENST00000457507 257 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 RPL32P9-201ENST00000487963 407 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 RNU6-943P-201ENST00000516960 98 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 GCSHP4-201ENST00000538792 439 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC068993.1-201ENST00000546724 589 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS1Q01581 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 AL354950.1-201ENST00000614150 568 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS1Q01581 CASC19-222ENST00000641321 1173 ntBASIC4.59□□□□□ -1.67
HMGCS1Q01581 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS1Q01581 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
HMGCS1Q01581 SMG1P6-201ENST00000532337 2930 ntBASIC4.59□□□□□ -1.68
HMGCS1Q01581 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 BTBD10P1-201ENST00000549824 1352 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 U3.30-201ENST00000391308 210 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 GAPDHP15-201ENST00000398586 975 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 AL589994.1-201ENST00000404962 340 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 SETP15-201ENST00000412724 337 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 RPS27P18-201ENST00000431701 247 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC010733.1-201ENST00000451515 401 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC110775.1-201ENST00000513721 462 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 RFPL4AP5-201ENST00000514977 504 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC022616.2-201ENST00000523185 300 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 MTND2P17-201ENST00000550281 688 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC084759.1-201ENST00000561168 290 ntBASIC4.58□□□□□ -1.68
HMGCS1Q01581 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms