Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC051619.2-201ENST00000559063 397 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC009117.1-201ENST00000563948 554 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 OR1F2P-201ENST00000570470 933 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AL021707.7-201ENST00000607991 416 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 AL596275.2-204ENST00000641628 552 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AL596275.2-206ENST00000641957 626 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
H3F3AP84243 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 AC120338.1-201ENST00000625074 1541 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 TLK1P1-201ENST00000456760 2440 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC139713.2-215ENST00000641428 5037 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 DDX18P5-201ENST00000534547 1306 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 RNU4-44P-201ENST00000363050 141 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 SNORA74A-201ENST00000364089 198 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.32□□□□□ -1.72
H3F3AP84243 GAPDHP15-201ENST00000398586 975 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 RN7SKP199-201ENST00000410325 305 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 VN1R37P-201ENST00000419096 748 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 RPS17P8-201ENST00000434525 335 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 AL451139.1-201ENST00000434718 346 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC234781.3-201ENST00000452540 973 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 AC239798.3-201ENST00000454459 408 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 ARL4AP1-201ENST00000503220 705 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.32□□□□□ -1.72
H3F3AP84243 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.32□□□□□ -1.72
H3F3AP84243 RN7SL802P-201ENST00000577858 299 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 AC022726.1-201ENST00000587475 207 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 AL121890.2-201ENST00000617644 465 ntBASIC4.32□□□□□ -1.72
H3F3AP84243 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.32□□□□□ -1.72
H3F3AP84243 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H3F3AP84243 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3F3AP84243 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.32□□□□□ -1.72
H3F3AP84243 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 SAMMSON-226ENST00000642089 1582 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 NCLP2-201ENST00000416078 1462 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
H3F3AP84243 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H3F3AP84243 AC008549.2-201ENST00000333482 706 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 U3.30-201ENST00000391308 210 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 U3.35-201ENST00000408405 208 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 EIF4HP2-201ENST00000424380 563 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 PA2G4P6-201ENST00000438325 1197 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RPL12P3-201ENST00000440080 396 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.31□□□□□ -1.72
H3F3AP84243 AL356390.1-201ENST00000455684 397 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RPS5P7-201ENST00000456664 608 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RPS3AP41-201ENST00000462701 778 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RPL21P6-201ENST00000479171 504 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RN7SL826P-201ENST00000479724 288 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3AP84243 AC073358.1-201ENST00000505671 684 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 RNA5SP249-201ENST00000516127 99 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.31□□□□□ -1.72
H3F3AP84243 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.31□□□□□ -1.72
H3F3AP84243 OR5D15P-201ENST00000531671 942 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.31□□□□□ -1.72
H3F3AP84243 CYCSP40-201ENST00000575927 294 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 MIR5699-201ENST00000578903 90 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 MIR4737-201ENST00000583979 81 ntBASIC4.31□□□□□ -1.72
H3F3AP84243 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms