Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC105313.1-201ENST00000509121 353 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC109464.1-201ENST00000511091 819 ntBASIC5.19□□□□□ -1.58
RAE1P78406 HMGN1P9-201ENST00000515212 298 ntBASIC5.19□□□□□ -1.58
RAE1P78406 NRBF2P4-201ENST00000520874 850 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 DEFB130C-202ENST00000530001 230 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 MTCO2P15-201ENST00000532655 656 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RAE1P78406 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 ATP5F1P7-201ENST00000567330 760 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.19□□□□□ -1.58
RAE1P78406 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 FAM72A-208ENST00000607379 1139 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC093783.1-201ENST00000612976 329 ntBASIC5.19□□□□□ -1.58
RAE1P78406 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 OR1S1-201ENST00000624470 978 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 OR8A1-204ENST00000642111 1145 ntBASIC5.19□□□□□ -1.58
RAE1P78406 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RAE1P78406 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 AC004656.1-201ENST00000568479 4951 ntBASIC5.18□□□□□ -1.58
RAE1P78406 PROS2P-201ENST00000474651 1951 ntBASIC5.18□□□□□ -1.58
RAE1P78406 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.18□□□□□ -1.58
RAE1P78406 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
RAE1P78406 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 RNU6-666P-201ENST00000363499 107 ntBASIC5.18□□□□□ -1.58
RAE1P78406 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 LRRC37BP1-201ENST00000398851 714 ntBASIC5.18□□□□□ -1.58
RAE1P78406 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 DBIP1-201ENST00000401435 260 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AL034374.1-201ENST00000406329 351 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC013404.1-201ENST00000413068 249 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.18□□□□□ -1.58
RAE1P78406 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AC002504.1-201ENST00000438281 691 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC092170.1-201ENST00000440211 356 ntBASIC5.18□□□□□ -1.58
RAE1P78406 MTND2P22-201ENST00000444325 1033 ntBASIC5.18□□□□□ -1.58
RAE1P78406 SETD6P1-201ENST00000444575 317 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AC090804.1-201ENST00000448870 490 ntBASIC5.18□□□□□ -1.58
RAE1P78406 OTX2P1-201ENST00000450956 354 ntBASIC5.18□□□□□ -1.58
RAE1P78406 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.18□□□□□ -1.58
RAE1P78406 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC092709.1-201ENST00000521355 1045 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.18□□□□□ -1.58
RAE1P78406 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
RAE1P78406 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
RAE1P78406 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.18□□□□□ -1.58
RAE1P78406 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 AC010547.6-201ENST00000571789 193 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 AC061975.8-201ENST00000587058 721 ntBASIC5.18□□□□□ -1.58
RAE1P78406 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.18□□□□□ -1.58
RAE1P78406 VN1R78P-201ENST00000597393 564 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.18□□□□□ -1.58
RAE1P78406 AC013444.2-201ENST00000603317 787 ntBASIC5.18□□□□□ -1.58
RAE1P78406 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
RAE1P78406 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 AL356274.1-201ENST00000617064 410 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 BX649567.1-201ENST00000642071 1134 ntBASIC5.18□□□□□ -1.58
RAE1P78406 SEC63P2-201ENST00000503863 1939 ntBASIC5.18□□□□□ -1.58
RAE1P78406 AL353796.1-201ENST00000561542 3241 ntBASIC5.18□□□□□ -1.58
RAE1P78406 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.18□□□□□ -1.58
RAE1P78406 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.18□□□□□ -1.58
RAE1P78406 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RAE1P78406 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAE1P78406 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms