Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AC008814.1-201ENST00000603797 406 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC009027.1-201ENST00000604510 479 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC009597.2-201ENST00000604659 592 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AL445528.2-201ENST00000620582 470 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RHBDL3P58872 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AL355488.2-201ENST00000609909 2850 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RHBDL3P58872 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.27□□□□□ -1.41
RHBDL3P58872 RNU6-317P-201ENST00000384031 107 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 MIR600-201ENST00000385007 98 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 U3.28-201ENST00000391249 210 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC013404.1-201ENST00000413068 249 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.27□□□□□ -1.41
RHBDL3P58872 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 SEC63P1-201ENST00000425785 1258 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 ETF1P3-201ENST00000430422 1160 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.27□□□□□ -1.41
RHBDL3P58872 RHOT1P3-201ENST00000436571 331 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.27□□□□□ -1.41
RHBDL3P58872 ELOCP10-201ENST00000440624 327 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.27□□□□□ -1.41
RHBDL3P58872 AC091685.2-201ENST00000454924 864 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC005229.2-201ENST00000456995 399 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 snoU13.29-201ENST00000459370 104 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 RPS23P1-201ENST00000491662 432 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 TPT1P3-201ENST00000492841 512 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 HMGN1P15-201ENST00000513870 295 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 RNU6-334P-201ENST00000517072 102 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.27□□□□□ -1.41
RHBDL3P58872 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.27□□□□□ -1.41
RHBDL3P58872 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.27□□□□□ -1.41
RHBDL3P58872 AC006363.1-201ENST00000603806 463 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 ELOCP34-201ENST00000604436 327 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL162431.4-201ENST00000604674 411 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 AC245100.7-201ENST00000609678 442 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL627230.1-201ENST00000613077 211 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC116447.1-201ENST00000613153 453 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL591926.8-201ENST00000616876 211 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AL138960.2-201ENST00000625145 535 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
RHBDL3P58872 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RHBDL3P58872 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 PHKBP1-201ENST00000450951 1951 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.27□□□□□ -1.41
RHBDL3P58872 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RHBDL3P58872 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RHBDL3P58872 HSPA8P14-201ENST00000552265 1805 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 AC004076.2-201ENST00000620532 3323 ntBASIC6.27□□□□□ -1.41
RHBDL3P58872 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.26□□□□□ -1.41
RHBDL3P58872 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RHBDL3P58872 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.26□□□□□ -1.41
RHBDL3P58872 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RHBDL3P58872 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RHBDL3P58872 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RHBDL3P58872 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.26□□□□□ -1.41
RHBDL3P58872 THAP12P4-201ENST00000528321 2266 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.26□□□□□ -1.41
RHBDL3P58872 RNA5SP123-201ENST00000363244 119 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 AC093719.1-202ENST00000392735 373 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 AL158825.1-201ENST00000414735 521 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 EIF4A1P1-201ENST00000420241 934 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.26□□□□□ -1.41
RHBDL3P58872 RPL7P29-201ENST00000437151 728 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 CBX1P4-201ENST00000439415 457 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.26□□□□□ -1.41
RHBDL3P58872 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.26□□□□□ -1.41
RHBDL3P58872 AC108751.3-201ENST00000461814 1020 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 PSAT1P4-201ENST00000466500 526 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.26□□□□□ -1.41
RHBDL3P58872 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.26□□□□□ -1.41
RHBDL3P58872 AC112206.4-201ENST00000515142 405 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 RNA5SP228-201ENST00000516232 133 ntBASIC6.26□□□□□ -1.41
RHBDL3P58872 FTH1P11-201ENST00000517577 551 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms