Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC095057.3-201ENST00000567102 1157 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC010735.1-201ENST00000567305 1026 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 MIR4443-201ENST00000585052 53 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 AP002906.1-201ENST00000603405 233 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC010200.2-201ENST00000605098 235 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AL355816.1-201ENST00000607951 118 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.29□□□□□ -1.56
NR1H2P55055 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NR1H2P55055 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 CASC19-261ENST00000641853 1638 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 GNL2P1-201ENST00000451274 2190 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 AC022031.1-201ENST00000585985 2593 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 ENSAP3-201ENST00000312710 333 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.28□□□□□ -1.56
NR1H2P55055 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NR1H2P55055 MIR92A2-201ENST00000385299 75 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 RNU6-1000P-201ENST00000391066 106 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 RPS3AP2-201ENST00000407190 754 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 RN7SKP286-201ENST00000410894 299 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NR1H2P55055 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 NPM1P24-201ENST00000428039 894 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NR1H2P55055 PRPF38AP1-201ENST00000451976 933 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 MTATP6P14-201ENST00000455189 673 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC004129.2-201ENST00000457229 287 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC245028.2-201ENST00000458673 253 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 RNA5SP103-201ENST00000459503 118 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 TRBV8-2-201ENST00000475637 270 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 GAPDHP71-201ENST00000511530 1003 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 AP006245.2-201ENST00000522004 300 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC112191.2-201ENST00000522428 333 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC104115.2-201ENST00000523026 687 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 DPRXP4-201ENST00000578053 568 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 AP005119.1-201ENST00000580956 292 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC096553.1-201ENST00000605169 829 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 MIR6768-201ENST00000610734 72 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC126175.1-201ENST00000617041 758 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 MIR6826-201ENST00000617808 98 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 AL669942.2-201ENST00000620352 697 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC023510.2-201ENST00000622162 746 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 AC090772.4-201ENST00000623599 362 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 U6.107-201ENST00000637108 79 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 RBPJP7-201ENST00000442803 1447 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 RBPJP5-201ENST00000449433 1447 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.28□□□□□ -1.56
NR1H2P55055 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 OR4F13P-202ENST00000560066 2054 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.28□□□□□ -1.56
NR1H2P55055 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR1H2P55055 AL078621.3-201ENST00000623707 2042 ntBASIC5.28□□□□□ -1.56
NR1H2P55055 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NR1H2P55055 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NR1H2P55055 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NR1H2P55055 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NR1H2P55055 AC114947.2-201ENST00000565748 2125 ntBASIC5.27□□□□□ -1.57
NR1H2P55055 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NR1H2P55055 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
NR1H2P55055 AC092162.3-201ENST00000624511 1624 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms