Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RN7SKP227-201ENST00000364445 330 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 RNA5SP509-201ENST00000364577 119 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS2P54868 OR51B3P-201ENST00000412287 913 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 H2AFZP5-201ENST00000446960 382 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS2P54868 AC108463.1-201ENST00000450258 347 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC010618.1-201ENST00000469924 477 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC109327.1-201ENST00000471666 403 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC020898.1-201ENST00000474167 787 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 RPL36AP41-201ENST00000493820 306 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS2P54868 RNU6-1334P-201ENST00000516032 105 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS2P54868 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS2P54868 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMGCS2P54868 AL020997.2-201ENST00000602607 184 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC103792.1-201ENST00000603591 919 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 OR7A19P-201ENST00000608051 733 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 AC011944.2-201ENST00000624440 683 ntBASIC5.48□□□□□ -1.53
HMGCS2P54868 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS2P54868 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 AC026523.2-201ENST00000625039 7739 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 ZNF137P-201ENST00000456718 1920 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 AL121839.2-201ENST00000565058 6943 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 MIR1193-201ENST00000408109 78 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 GLUD1P9-201ENST00000420997 1173 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCS2P54868 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGCS2P54868 AC111000.5-201ENST00000506559 1178 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 AC073137.1-201ENST00000605636 634 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 MIR6716-201ENST00000613413 80 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 U3.53-201ENST00000628922 216 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGCS2P54868 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 OR14L1P-202ENST00000641545 3009 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMGCS2P54868 AC022417.1-201ENST00000624768 1303 ntBASIC5.47□□□□□ -1.53
HMGCS2P54868 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS2P54868 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCS2P54868 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.46□□□□□ -1.53
HMGCS2P54868 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGCS2P54868 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.46□□□□□ -1.53
HMGCS2P54868 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.46□□□□□ -1.53
HMGCS2P54868 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 SNORA71.2-201ENST00000364941 134 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HMGCS2P54868 AC013429.2-201ENST00000418798 781 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AL691447.1-201ENST00000419456 387 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 RPL17P36-201ENST00000420302 549 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCS2P54868 PPP1R11P1-201ENST00000486095 376 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 GOLGA5P1-201ENST00000507317 980 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AC007016.1-201ENST00000512110 244 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.46□□□□□ -1.54
HMGCS2P54868 AC138701.1-201ENST00000524329 714 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 MIR3939-201ENST00000582614 106 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AC069366.1-201ENST00000583159 838 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 MIR4420-201ENST00000583944 77 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AC115286.1-201ENST00000604298 434 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGCS2P54868 AC092653.1-201ENST00000608509 531 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AL133243.1-201ENST00000614487 366 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 AC010809.3-201ENST00000621310 641 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 AC009120.7-201ENST00000623452 780 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGCS2P54868 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGCS2P54868 AC093297.3-201ENST00000607056 2517 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 CDY11P-201ENST00000447168 1651 ntBASIC5.46□□□□□ -1.54
HMGCS2P54868 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms