Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
BRCA2P51587 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
BRCA2P51587 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA2P51587 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA2P51587 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
BRCA2P51587 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BRCA2P51587 RPL21P17-201ENST00000397467 475 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 GAPDHP14-201ENST00000450472 937 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.91□□□□□ -1.62
BRCA2P51587 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.91□□□□□ -1.62
BRCA2P51587 AL049830.4-201ENST00000555149 351 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AC005412.1-201ENST00000580812 1049 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCA2P51587 OR2L1P-202ENST00000641567 1023 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
BRCA2P51587 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 AC008124.1-201ENST00000609803 9730 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.91□□□□□ -1.62
BRCA2P51587 TBCAP1-201ENST00000436520 327 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCA2P51587 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 AC027369.5-201ENST00000533838 755 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 DYNLL1P4-201ENST00000549314 266 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.91□□□□□ -1.62
BRCA2P51587 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 AP000580.1-201ENST00000404439 358 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 MFSD13B-201ENST00000420133 1290 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AL590399.2-201ENST00000427536 309 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 RNA5SP519-201ENST00000516480 119 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCA2P51587 IFITM8P-201ENST00000522529 394 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCA2P51587 AC024224.1-201ENST00000538284 609 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 BPIFA4P-203ENST00000603168 689 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 AC007546.1-201ENST00000619452 559 ntBASIC4.91□□□□□ -1.62
BRCA2P51587 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCA2P51587 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCA2P51587 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA2P51587 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 ABCC13-202ENST00000463099 3842 ntBASIC4.9□□□□□ -1.62
BRCA2P51587 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.9□□□□□ -1.62
BRCA2P51587 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.9□□□□□ -1.62
BRCA2P51587 RGS17P1-201ENST00000423358 553 ntBASIC4.9□□□□□ -1.62
BRCA2P51587 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.9□□□□□ -1.62
BRCA2P51587 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.9□□□□□ -1.62
BRCA2P51587 AC021193.1-201ENST00000511607 420 ntBASIC4.9□□□□□ -1.62
BRCA2P51587 Y_RNA.719-201ENST00000517156 106 ntBASIC4.9□□□□□ -1.62
BRCA2P51587 HSPE1P5-201ENST00000561489 272 ntBASIC4.9□□□□□ -1.62
BRCA2P51587 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.9□□□□□ -1.62
BRCA2P51587 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCA2P51587 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.9□□□□□ -1.63
BRCA2P51587 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
BRCA2P51587 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
BRCA2P51587 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
BRCA2P51587 SNORA5A-201ENST00000384111 134 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 COX6B1P7-201ENST00000430845 235 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.9□□□□□ -1.63
BRCA2P51587 SETP6-201ENST00000479329 568 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.9□□□□□ -1.63
BRCA2P51587 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 AL161729.3-201ENST00000603533 673 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 AL137843.1-201ENST00000605078 385 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
BRCA2P51587 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
BRCA2P51587 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
BRCA2P51587 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 RNA5SP513-201ENST00000364648 118 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 RNA5SP241-201ENST00000391326 114 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 RN7SKP284-201ENST00000411002 343 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 PTMAP3-201ENST00000447474 330 ntBASIC4.9□□□□□ -1.63
BRCA2P51587 RNA5SP246-201ENST00000458909 119 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms