Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.81□□□□□ -1.64
APOBEC1P41238 AL162431.4-201ENST00000604674 411 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 LSM1P2-201ENST00000604911 322 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 AL121652.1-201ENST00000608851 448 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 AL050303.3-201ENST00000613704 284 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 AC011472.4-201ENST00000615848 491 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 AC145207.9-201ENST00000623802 325 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.81□□□□□ -1.64
APOBEC1P41238 AC132825.7-201ENST00000638744 335 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.81□□□□□ -1.64
APOBEC1P41238 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOBEC1P41238 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOBEC1P41238 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.81□□□□□ -1.64
APOBEC1P41238 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.81□□□□□ -1.64
APOBEC1P41238 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
APOBEC1P41238 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOBEC1P41238 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
APOBEC1P41238 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOBEC1P41238 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
APOBEC1P41238 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOBEC1P41238 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 SNORA67-201ENST00000384423 137 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 MIR105-1-201ENST00000385222 81 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOBEC1P41238 RNU1-149P-201ENST00000390870 161 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 U3.25-201ENST00000391209 220 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 OR8V1P-201ENST00000395193 873 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC105402.1-201ENST00000413336 545 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 DPY19L1P2-201ENST00000426647 915 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOBEC1P41238 HMGN2P27-201ENST00000427352 270 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 FABP5P3-201ENST00000437960 408 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AL606517.1-201ENST00000446914 387 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC108729.1-201ENST00000487812 947 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 TRAV31-201ENST00000502780 342 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.8□□□□□ -1.64
APOBEC1P41238 IMPA1P1-201ENST00000510718 842 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC138832.1-201ENST00000522871 556 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AL049779.2-201ENST00000553847 315 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 SS18L2P2-201ENST00000583960 235 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC010503.3-201ENST00000594355 540 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC091057.3-201ENST00000602684 733 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.8□□□□□ -1.64
APOBEC1P41238 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 CASC19-264ENST00000641912 1184 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 OR9K1P-202ENST00000641111 3217 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 VPS35P1-201ENST00000563400 1518 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 OR55B1P-203ENST00000641518 2602 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 AC023421.1-201ENST00000590535 1785 ntBASIC4.8□□□□□ -1.64
APOBEC1P41238 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOBEC1P41238 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.8□□□□□ -1.64
APOBEC1P41238 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.8□□□□□ -1.64
APOBEC1P41238 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOBEC1P41238 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOBEC1P41238 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOBEC1P41238 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOBEC1P41238 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOBEC1P41238 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.79□□□□□ -1.64
APOBEC1P41238 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.79□□□□□ -1.64
APOBEC1P41238 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
APOBEC1P41238 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOBEC1P41238 AL022322.2-201ENST00000624072 20397 ntBASIC4.79□□□□□ -1.64
APOBEC1P41238 AL627171.1-201ENST00000618845 1308 ntBASIC4.79□□□□□ -1.64
APOBEC1P41238 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOBEC1P41238 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
APOBEC1P41238 AC097063.1-201ENST00000426714 1797 ntBASIC4.79□□□□□ -1.64
APOBEC1P41238 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms