Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL133244.1-201ENST00000456007 258 ntBASIC4.79□□□□□ -1.64
RORAP35398 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
RORAP35398 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
RORAP35398 IGLV2-34-201ENST00000490007 283 ntBASIC4.79□□□□□ -1.64
RORAP35398 AC010350.1-201ENST00000504908 231 ntBASIC4.79□□□□□ -1.64
RORAP35398 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.79□□□□□ -1.64
RORAP35398 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 AC022884.2-201ENST00000578535 580 ntBASIC4.79□□□□□ -1.64
RORAP35398 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.79□□□□□ -1.64
RORAP35398 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 MIR6748-201ENST00000610433 71 ntBASIC4.79□□□□□ -1.64
RORAP35398 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.79□□□□□ -1.64
RORAP35398 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.79□□□□□ -1.64
RORAP35398 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
RORAP35398 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.79□□□□□ -1.64
RORAP35398 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RORAP35398 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RORAP35398 AL450345.1-202ENST00000605741 3881 ntBASIC4.79□□□□□ -1.64
RORAP35398 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AL034370.1-201ENST00000397254 1590 ntBASIC4.78□□□□□ -1.64
RORAP35398 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC017079.1-201ENST00000333650 415 ntBASIC4.78□□□□□ -1.64
RORAP35398 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 USP9YP9-201ENST00000429406 715 ntBASIC4.78□□□□□ -1.64
RORAP35398 OR6C71P-201ENST00000432580 913 ntBASIC4.78□□□□□ -1.64
RORAP35398 AC046176.1-201ENST00000435260 1170 ntBASIC4.78□□□□□ -1.64
RORAP35398 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 RPL7P11-201ENST00000437586 658 ntBASIC4.78□□□□□ -1.64
RORAP35398 RAB9AP5-201ENST00000437794 597 ntBASIC4.78□□□□□ -1.64
RORAP35398 PRPF38AP2-201ENST00000438179 851 ntBASIC4.78□□□□□ -1.64
RORAP35398 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.78□□□□□ -1.64
RORAP35398 RAB9AP2-201ENST00000443911 597 ntBASIC4.78□□□□□ -1.64
RORAP35398 AL137845.2-201ENST00000444292 988 ntBASIC4.78□□□□□ -1.64
RORAP35398 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.78□□□□□ -1.64
RORAP35398 AC022431.1-201ENST00000450941 438 ntBASIC4.78□□□□□ -1.64
RORAP35398 AC091180.1-201ENST00000462104 372 ntBASIC4.78□□□□□ -1.64
RORAP35398 RPS29P22-201ENST00000472363 168 ntBASIC4.78□□□□□ -1.64
RORAP35398 RN7SL441P-201ENST00000492388 296 ntBASIC4.78□□□□□ -1.64
RORAP35398 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.78□□□□□ -1.64
RORAP35398 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.78□□□□□ -1.64
RORAP35398 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC107918.3-201ENST00000533272 382 ntBASIC4.78□□□□□ -1.64
RORAP35398 GCSHP4-201ENST00000538792 439 ntBASIC4.78□□□□□ -1.64
RORAP35398 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC104785.1-201ENST00000603220 588 ntBASIC4.78□□□□□ -1.64
RORAP35398 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC108359.1-201ENST00000616451 1211 ntBASIC4.78□□□□□ -1.64
RORAP35398 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RORAP35398 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
RORAP35398 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RORAP35398 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
RORAP35398 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.78□□□□□ -1.65
RORAP35398 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 VPS35P1-201ENST00000563400 1518 ntBASIC4.77□□□□□ -1.65
RORAP35398 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
RORAP35398 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RORAP35398 RN7SKP115-201ENST00000363177 317 ntBASIC4.77□□□□□ -1.65
RORAP35398 RNVU1-6-201ENST00000364688 164 ntBASIC4.77□□□□□ -1.65
RORAP35398 AC007618.1-201ENST00000366455 732 ntBASIC4.77□□□□□ -1.65
RORAP35398 SNORA2.3-201ENST00000383920 135 ntBASIC4.77□□□□□ -1.65
RORAP35398 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 AL512430.2-201ENST00000406786 339 ntBASIC4.77□□□□□ -1.65
RORAP35398 RN7SKP216-201ENST00000411050 312 ntBASIC4.77□□□□□ -1.65
RORAP35398 RN7SKP247-201ENST00000411094 308 ntBASIC4.77□□□□□ -1.65
RORAP35398 RPL12P9-201ENST00000412942 488 ntBASIC4.77□□□□□ -1.65
RORAP35398 RPA2P2-201ENST00000419698 796 ntBASIC4.77□□□□□ -1.65
RORAP35398 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
RORAP35398 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
RORAP35398 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.77□□□□□ -1.65
RORAP35398 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.77□□□□□ -1.65
RORAP35398 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 GTF3AP5-201ENST00000442645 697 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms