Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNRPCP2-201ENST00000504370 475 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 ENPP7P11-201ENST00000505915 627 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC138832.1-201ENST00000522871 556 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 HAUS8P1-201ENST00000549005 542 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 SS18L2P2-201ENST00000583960 235 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC010200.2-201ENST00000605098 235 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC135803.1-201ENST00000608748 565 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC116447.1-201ENST00000613153 453 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 LINC00216-201ENST00000623548 1126 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC005332.5-201ENST00000591222 2919 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC010329.2-201ENST00000595195 2737 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 RN7SKP114-201ENST00000410327 279 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL353597.2-202ENST00000434901 373 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL627308.1-201ENST00000435693 821 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 KNOP1P3-201ENST00000446933 426 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 RPS18P6-201ENST00000476880 458 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 RN7SKP260-201ENST00000516907 149 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC027308.1-201ENST00000517993 110 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL512310.9-201ENST00000553311 948 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC016180.1-201ENST00000567945 403 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL121612.2-201ENST00000612261 482 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AC016911.1-201ENST00000613297 452 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 ADAM5-202ENST00000399789 1942 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 AL359715.4-201ENST00000606629 1436 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 OR51C1P-202ENST00000641159 1444 ntBASIC5.14□□□□□ -1.59
HLA-DPA1P20036 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DPA1P20036 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RNU6-244P-201ENST00000391028 104 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 U3.32-201ENST00000408116 212 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 U3.36-201ENST00000408418 213 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RNU6-603P-201ENST00000411403 107 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC007738.1-201ENST00000413892 348 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 EIF4A1P11-201ENST00000451239 222 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC245028.2-201ENST00000458673 253 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RNU6-1218P-201ENST00000458990 108 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RNU7-27P-201ENST00000459281 62 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC005532.2-201ENST00000467154 373 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC097484.1-201ENST00000471148 389 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RN7SL727P-201ENST00000482164 296 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC022832.1-201ENST00000530718 645 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms