Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CIR1P1-201ENST00000524055 1133 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.21□□□□□ -1.58
PCNAP12004 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCNAP12004 OR11H3P-201ENST00000554547 982 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AL390726.5-202ENST00000564800 256 ntBASIC5.21□□□□□ -1.58
PCNAP12004 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.21□□□□□ -1.58
PCNAP12004 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 RN7SL290P-201ENST00000578661 300 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 AC084373.1-201ENST00000603311 235 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC009027.1-201ENST00000604510 479 ntBASIC5.21□□□□□ -1.58
PCNAP12004 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 AC078880.5-201ENST00000617845 421 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC090772.4-201ENST00000623599 362 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC135068.5-201ENST00000624197 983 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AL691477.1-201ENST00000624398 162 ntBASIC5.21□□□□□ -1.58
PCNAP12004 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.21□□□□□ -1.58
PCNAP12004 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.21□□□□□ -1.58
PCNAP12004 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 CASC19-281ENST00000642118 1554 ntBASIC5.21□□□□□ -1.58
PCNAP12004 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCNAP12004 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 RNU6-354P-201ENST00000383862 107 ntBASIC5.2□□□□□ -1.58
PCNAP12004 RNU6-610P-201ENST00000384264 107 ntBASIC5.2□□□□□ -1.58
PCNAP12004 RNA5SP241-201ENST00000391326 114 ntBASIC5.2□□□□□ -1.58
PCNAP12004 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 RNU2-17P-201ENST00000410290 190 ntBASIC5.2□□□□□ -1.58
PCNAP12004 MTND4P11-201ENST00000417020 1058 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 SFR1P2-201ENST00000421841 730 ntBASIC5.2□□□□□ -1.58
PCNAP12004 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 RPL12P17-201ENST00000432393 498 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.2□□□□□ -1.58
PCNAP12004 PCNPP2-201ENST00000441651 455 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.2□□□□□ -1.58
PCNAP12004 AC073909.1-201ENST00000447112 999 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC008379.1-201ENST00000463655 464 ntBASIC5.2□□□□□ -1.58
PCNAP12004 RPL21P18-201ENST00000469899 480 ntBASIC5.2□□□□□ -1.58
PCNAP12004 CBX1P5-201ENST00000475330 559 ntBASIC5.2□□□□□ -1.58
PCNAP12004 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 CDC42P3-201ENST00000518493 633 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 AP004607.2-201ENST00000533949 322 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.2□□□□□ -1.58
PCNAP12004 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 MIR1273E-201ENST00000581165 102 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.2□□□□□ -1.58
PCNAP12004 AC023762.1-201ENST00000603280 584 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC096553.1-201ENST00000605169 829 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AL121652.1-201ENST00000608851 448 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AP000864.1-201ENST00000609424 650 ntBASIC5.2□□□□□ -1.58
PCNAP12004 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 AC244107.2-201ENST00000611773 76 ntBASIC5.2□□□□□ -1.58
PCNAP12004 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC007275.1-201ENST00000621243 671 ntBASIC5.2□□□□□ -1.58
PCNAP12004 OR4G3P-201ENST00000633500 913 ntBASIC5.2□□□□□ -1.58
PCNAP12004 AC099654.9-201ENST00000637055 678 ntBASIC5.2□□□□□ -1.58
PCNAP12004 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.2□□□□□ -1.58
PCNAP12004 MTND5P11-201ENST00000511037 1812 ntBASIC5.2□□□□□ -1.58
PCNAP12004 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCNAP12004 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCNAP12004 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCNAP12004 MAPK10-349ENST00000641767 3661 ntBASIC5.19□□□□□ -1.58
PCNAP12004 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCNAP12004 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms