Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC8.01□□□□□ -1.13
TOP2AP11388 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOP2AP11388 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOP2AP11388 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
TOP2AP11388 UBBP2-201ENST00000376781 231 ntBASIC8□□□□□ -1.13
TOP2AP11388 RPL23AP52-201ENST00000439311 478 ntBASIC8□□□□□ -1.13
TOP2AP11388 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8□□□□□ -1.13
TOP2AP11388 RN7SL703P-201ENST00000578485 302 ntBASIC8□□□□□ -1.13
TOP2AP11388 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOP2AP11388 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
TOP2AP11388 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOP2AP11388 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOP2AP11388 AL391684.1-202ENST00000641293 1636 ntBASIC8□□□□□ -1.13
TOP2AP11388 AP001029.2-203ENST00000589795 4910 ntBASIC8□□□□□ -1.13
TOP2AP11388 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOP2AP11388 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TOP2AP11388 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.99□□□□□ -1.13
TOP2AP11388 AL389915.1-201ENST00000422463 466 ntBASIC7.99□□□□□ -1.13
TOP2AP11388 COX6CP15-201ENST00000426313 211 ntBASIC7.99□□□□□ -1.13
TOP2AP11388 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.99□□□□□ -1.13
TOP2AP11388 AC104651.2-201ENST00000447549 528 ntBASIC7.99□□□□□ -1.13
TOP2AP11388 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.99□□□□□ -1.13
TOP2AP11388 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.99□□□□□ -1.13
TOP2AP11388 AC015914.2-201ENST00000618167 288 ntBASIC7.99□□□□□ -1.13
TOP2AP11388 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
TOP2AP11388 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.99□□□□□ -1.13
TOP2AP11388 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOP2AP11388 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOP2AP11388 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
TOP2AP11388 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
TOP2AP11388 AL161909.1-201ENST00000397390 712 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 AL445189.1-201ENST00000405722 338 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 RAB9AP4-201ENST00000415230 609 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.98□□□□□ -1.13
TOP2AP11388 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.98□□□□□ -1.13
TOP2AP11388 OR8G7P-201ENST00000616658 848 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 OR8B1P-202ENST00000641132 1178 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.98□□□□□ -1.13
TOP2AP11388 AC092451.3-201ENST00000625067 1343 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.98□□□□□ -1.13
TOP2AP11388 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOP2AP11388 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOP2AP11388 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TOP2AP11388 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
TOP2AP11388 RNU1-94P-201ENST00000362627 173 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 RPS27AP11-201ENST00000402798 447 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 AC105137.1-201ENST00000484355 562 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 RPL35P6-201ENST00000490024 372 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.98□□□□□ -1.13
TOP2AP11388 AL139254.3-201ENST00000641097 674 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 SCARNA15-201ENST00000607520 4325 ntBASIC7.98□□□□□ -1.13
TOP2AP11388 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.98□□□□□ -1.13
TOP2AP11388 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.98□□□□□ -1.13
TOP2AP11388 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.97□□□□□ -1.13
TOP2AP11388 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 LARP1BP1-201ENST00000506036 1359 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 RNU1-132P-201ENST00000364300 164 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.97□□□□□ -1.13
TOP2AP11388 AL354766.1-201ENST00000423396 542 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 AL132765.1-201ENST00000434165 553 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 AC044797.1-201ENST00000445744 679 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.97□□□□□ -1.13
TOP2AP11388 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.97□□□□□ -1.13
TOP2AP11388 AC023043.4-201ENST00000612081 449 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.97□□□□□ -1.13
TOP2AP11388 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOP2AP11388 ADAM24P-201ENST00000398655 2101 ntBASIC7.97□□□□□ -1.13
TOP2AP11388 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
TOP2AP11388 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TOP2AP11388 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
TOP2AP11388 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
TOP2AP11388 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
TOP2AP11388 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOP2AP11388 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.96□□□□□ -1.14
TOP2AP11388 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.96□□□□□ -1.14
TOP2AP11388 AL356095.1-201ENST00000417217 199 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.96□□□□□ -1.14
TOP2AP11388 NPM1P26-201ENST00000426339 738 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.96□□□□□ -1.14
TOP2AP11388 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOP2AP11388 AC245028.2-201ENST00000458673 253 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 SLC25A15P5-201ENST00000508033 253 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 HMGB1P23-201ENST00000518743 568 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.96□□□□□ -1.14
TOP2AP11388 AC010547.7-201ENST00000570323 333 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 AC023762.1-201ENST00000603280 584 ntBASIC7.96□□□□□ -1.14
TOP2AP11388 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.96□□□□□ -1.14
TOP2AP11388 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOP2AP11388 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms