Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.79□□□□□ -1.8
IFNA1P01562 AL845552.1-201ENST00000556820 323 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFNA1P01562 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.79□□□□□ -1.8
IFNA1P01562 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.79□□□□□ -1.8
IFNA1P01562 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.79□□□□□ -1.8
IFNA1P01562 OR1AB1P-201ENST00000585564 761 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.79□□□□□ -1.8
IFNA1P01562 RPL7P50-201ENST00000600588 727 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.79□□□□□ -1.8
IFNA1P01562 AC011500.1-201ENST00000601963 469 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC008638.3-201ENST00000603341 463 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AL139286.1-201ENST00000604465 483 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.79□□□□□ -1.8
IFNA1P01562 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC111152.1-202ENST00000635848 339 ntBASIC3.79□□□□□ -1.8
IFNA1P01562 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.79□□□□□ -1.8
IFNA1P01562 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFNA1P01562 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
IFNA1P01562 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFNA1P01562 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.78□□□□□ -1.8
IFNA1P01562 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
IFNA1P01562 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 AL445437.1-201ENST00000623157 3087 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 RNA5SP319-201ENST00000362768 119 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 ATP5HP3-201ENST00000396994 486 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 NUDT19P3-201ENST00000404698 555 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 GSTM3P2-201ENST00000412746 530 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 CENPIP1-201ENST00000425713 902 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 RPS6P12-201ENST00000432491 726 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 FMO7P-201ENST00000436045 768 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 SCAND3P1-201ENST00000439854 1060 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AP006222.1-205ENST00000450734 457 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 RN7SL568P-201ENST00000493069 298 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC025458.1-201ENST00000506046 166 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC006499.6-201ENST00000511169 607 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 RNU6-709P-201ENST00000517257 104 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
IFNA1P01562 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.78□□□□□ -1.8
IFNA1P01562 BTG1P1-201ENST00000540396 508 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC079600.1-201ENST00000550326 297 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 MIR3154-201ENST00000577829 84 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC000068.2-201ENST00000608816 460 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 RPSAP73-201ENST00000614820 330 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 AL359757.1-201ENST00000623176 255 ntBASIC3.78□□□□□ -1.8
IFNA1P01562 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.78□□□□□ -1.8
IFNA1P01562 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
IFNA1P01562 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IFNA1P01562 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
IFNA1P01562 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
IFNA1P01562 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.77□□□□□ -1.81
IFNA1P01562 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.77□□□□□ -1.81
IFNA1P01562 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
IFNA1P01562 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
IFNA1P01562 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
IFNA1P01562 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.77□□□□□ -1.81
IFNA1P01562 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
IFNA1P01562 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
IFNA1P01562 RN7SKP184-201ENST00000362348 333 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 RNA5SP52-201ENST00000362448 134 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 RHOT1P2-201ENST00000366423 333 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 MIR600-201ENST00000385007 98 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 MT-RNR1-201ENST00000389680 954 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 RNU1-149P-201ENST00000390870 161 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
IFNA1P01562 MIR1182-201ENST00000408363 97 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 AL450992.3-201ENST00000413192 568 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.77□□□□□ -1.81
IFNA1P01562 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
IFNA1P01562 AC093166.3-201ENST00000448785 303 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 AC007386.1-201ENST00000455212 582 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 Z92846.1-201ENST00000456203 268 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.77□□□□□ -1.81
IFNA1P01562 AL133445.1-201ENST00000467051 452 ntBASIC3.77□□□□□ -1.81
IFNA1P01562 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms