Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC25A51P1-201ENST00000468432 871 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFBP01127 AC022034.3-201ENST00000471393 478 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 LARP7P4-201ENST00000481075 878 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 RPSAP51-201ENST00000497462 645 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFBP01127 OR7E10P-201ENST00000526420 991 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PDGFBP01127 SULT1C2P2-201ENST00000562517 294 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 AC106785.1-201ENST00000565935 262 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 RPL12P25-202ENST00000598100 674 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 OR51C1P-201ENST00000608504 942 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 AC004232.3-201ENST00000622977 525 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 AP003400.3-201ENST00000624904 346 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDGFBP01127 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.14□□□□□ -1.59
PDGFBP01127 AC108751.5-201ENST00000492880 1336 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PDGFBP01127 AL138820.1-201ENST00000617901 5305 ntBASIC5.14□□□□□ -1.59
PDGFBP01127 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFBP01127 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDGFBP01127 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFBP01127 RNU6-670P-201ENST00000364312 104 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 RPL23AP17-201ENST00000401064 499 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AL021331.1-201ENST00000402817 582 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AL049697.2-201ENST00000403708 294 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFBP01127 GAPDHP49-201ENST00000421421 961 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC073410.1-201ENST00000435125 589 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 OR7E125P-201ENST00000443450 846 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 TCEA1P1-201ENST00000449716 880 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 MTND2P28-201ENST00000457540 1044 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 snoU13.29-201ENST00000459370 104 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.13□□□□□ -1.59
PDGFBP01127 AC104629.2-201ENST00000468627 598 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC020779.1-201ENST00000478757 796 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 AC025674.1-201ENST00000507074 324 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC021106.1-201ENST00000509020 1058 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC007224.1-201ENST00000564410 144 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC069366.1-201ENST00000583159 838 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 VN1R85P-201ENST00000601587 426 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC009237.13-201ENST00000603193 276 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AP005432.2-201ENST00000608162 586 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC244107.2-201ENST00000611773 76 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC024941.1-201ENST00000612250 334 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.13□□□□□ -1.59
PDGFBP01127 MIR6716-201ENST00000613413 80 ntBASIC5.13□□□□□ -1.59
PDGFBP01127 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDGFBP01127 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.13□□□□□ -1.59
PDGFBP01127 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFBP01127 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PDGFBP01127 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PDGFBP01127 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 RNU1-85P-201ENST00000364127 164 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFBP01127 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 RPEP3-201ENST00000425462 676 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 NRBF2P3-201ENST00000432731 865 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 Z85994.2-201ENST00000434327 452 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 RAD1P2-201ENST00000446414 663 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AL157884.3-201ENST00000448273 1184 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AURKAPS2-201ENST00000454983 333 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFBP01127 SNORA84-201ENST00000459229 133 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC109327.1-201ENST00000471666 403 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms