Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC069542.2-201ENST00000624816 216 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 AC073488.6-201ENST00000632293 754 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.74□□□□□ -1.17
ALDH1A1P00352 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ALDH1A1P00352 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ALDH1A1P00352 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ALDH1A1P00352 AC020658.2-201ENST00000559030 4020 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 LINC02035-201ENST00000610128 5476 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
ALDH1A1P00352 AC023818.2-201ENST00000623817 2304 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 LPAL2-203ENST00000454031 2498 ntBASIC7.74□□□□□ -1.17
ALDH1A1P00352 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ALDH1A1P00352 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.74□□□□□ -1.17
ALDH1A1P00352 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
ALDH1A1P00352 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
ALDH1A1P00352 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 THAP12P7-201ENST00000520248 2290 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL356057.3-201ENST00000402607 340 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL663061.1-201ENST00000416625 580 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC073136.2-201ENST00000417282 849 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 RPL21P50-201ENST00000417698 477 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 VDAC1P6-201ENST00000430062 855 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 ANKRD54P1-201ENST00000433115 471 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL353898.1-201ENST00000444055 238 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 Y_RNA.632-201ENST00000459189 102 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 RPS4XP14-201ENST00000493072 781 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC109635.6-201ENST00000525487 1113 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC239860.2-201ENST00000525886 270 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC023827.2-201ENST00000566880 1061 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC008507.3-201ENST00000585753 472 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL365434.2-201ENST00000607979 234 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 RMST_3.1-201ENST00000611651 109 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC005332.6-201ENST00000613178 446 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 RMST_7.1-201ENST00000621935 268 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AC129778.1-202ENST00000623812 261 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AL591379.1-207ENST00000635982 261 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.73□□□□□ -1.17
ALDH1A1P00352 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ALDH1A1P00352 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.72□□□□□ -1.17
ALDH1A1P00352 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 PRNCR1-201ENST00000635449 12727 ntBASIC7.72□□□□□ -1.17
ALDH1A1P00352 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.72□□□□□ -1.17
ALDH1A1P00352 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
ALDH1A1P00352 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.72□□□□□ -1.17
ALDH1A1P00352 SNORD42.2-201ENST00000365570 69 ntBASIC7.72□□□□□ -1.17
ALDH1A1P00352 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ALDH1A1P00352 Y_RNA.474-201ENST00000384341 102 ntBASIC7.72□□□□□ -1.17
ALDH1A1P00352 RNU4-70P-201ENST00000384579 139 ntBASIC7.72□□□□□ -1.17
ALDH1A1P00352 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms