Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.85□□□□□ -1.63
CLPTM1O96005 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC022404.1-201ENST00000555320 273 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AL049872.1-201ENST00000556323 322 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AC090330.1-201ENST00000588646 764 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.85□□□□□ -1.63
CLPTM1O96005 DNAJC19P3-201ENST00000594491 331 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 FO393422.1-201ENST00000603908 708 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.85□□□□□ -1.63
CLPTM1O96005 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC004477.3-201ENST00000614061 590 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 uc_338.18-201ENST00000615451 175 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 MIR6729-201ENST00000618194 65 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC092435.4-201ENST00000623012 4159 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLPTM1O96005 AC110792.3-201ENST00000595906 1614 ntBASIC4.85□□□□□ -1.63
CLPTM1O96005 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.85□□□□□ -1.63
CLPTM1O96005 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CLPTM1O96005 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLPTM1O96005 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 CASC19-204ENST00000641001 2055 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC006210.2-201ENST00000367074 1545 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 MIR589-201ENST00000385238 99 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AL512422.1-201ENST00000407033 553 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 BMS1P17-202ENST00000416720 316 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 TMBIM7P-201ENST00000418074 855 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AL354692.1-201ENST00000423044 315 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 CHEK2P5-201ENST00000423877 246 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLPTM1O96005 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 MTCO1P45-201ENST00000431457 267 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 NOP56P2-201ENST00000447491 769 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AP002345.1-201ENST00000456493 928 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 RPS27AP2-201ENST00000457576 465 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC023141.9-201ENST00000458734 412 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC022336.1-201ENST00000475510 337 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.84□□□□□ -1.63
CLPTM1O96005 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CLPTM1O96005 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.84□□□□□ -1.63
CLPTM1O96005 BNIP3P27-201ENST00000599991 412 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC011626.1-201ENST00000604710 562 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 HMGB1P51-201ENST00000605166 638 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC242628.1-201ENST00000606810 391 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 MIR6862-1-201ENST00000613016 70 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 MIR6862-2-201ENST00000614755 70 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AL445493.3-201ENST00000619568 477 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC079298.2-201ENST00000623885 459 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 SAMMSON-209ENST00000641222 1100 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 LINC01109-201ENST00000603837 3081 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 MAPK10-286ENST00000641208 8747 ntBASIC4.84□□□□□ -1.63
CLPTM1O96005 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.63
CLPTM1O96005 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLPTM1O96005 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLPTM1O96005 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms