Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 FCF1P7-201ENST00000451185 558 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AL591473.1-201ENST00000464297 313 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN9O95484 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN9O95484 AC109462.1-201ENST00000491087 368 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AC008638.1-201ENST00000506035 866 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN9O95484 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN9O95484 AC138938.1-201ENST00000515431 782 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 RNU6-709P-201ENST00000517257 104 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN9O95484 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN9O95484 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN9O95484 AC005000.1-201ENST00000536192 288 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN9O95484 AC122134.1-201ENST00000565664 1104 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 MTND2P13-201ENST00000577438 1039 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 FAM106CP-201ENST00000582212 507 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN9O95484 MEMO1P5-201ENST00000604810 406 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AL121612.2-201ENST00000612261 482 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AC009163.6-201ENST00000612367 342 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 EIF3FP1-201ENST00000613970 806 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AC006453.5-201ENST00000636451 619 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 AL606537.1-201ENST00000607258 2011 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLDN9O95484 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN9O95484 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 RBPJP2-201ENST00000618187 1444 ntBASIC4.71□□□□□ -1.66
CLDN9O95484 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN9O95484 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN9O95484 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN9O95484 RLIMP2-201ENST00000427891 1563 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN9O95484 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN9O95484 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 DHX9P1-201ENST00000436565 3076 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 RNA5SP443-201ENST00000363083 132 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 MT-RNR1-201ENST00000389680 954 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AP000580.1-201ENST00000404439 358 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AP002530.1-201ENST00000405705 684 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 U3.35-201ENST00000408405 208 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 RN7SKP273-201ENST00000411392 314 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 E2F6P2-201ENST00000420708 748 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN9O95484 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AL451139.1-201ENST00000434718 346 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC026348.1-201ENST00000462549 1053 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC022336.1-201ENST00000475510 337 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 RN7SL808P-201ENST00000496066 299 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 RN7SL558P-201ENST00000497468 299 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC073358.1-201ENST00000505671 684 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 RN7SKP46-201ENST00000515942 234 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN9O95484 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN9O95484 HAUS8P1-201ENST00000549005 542 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN9O95484 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 MIR3691-201ENST00000578066 90 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN9O95484 OR7E18P-201ENST00000592589 702 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC138473.1-201ENST00000605717 526 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC010424.2-201ENST00000607594 443 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AC117490.2-201ENST00000610042 594 ntBASIC4.7□□□□□ -1.66
CLDN9O95484 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN9O95484 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN9O95484 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN9O95484 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms