Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OR7A19P-201ENST00000608051 733 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC073342.3-201ENST00000624211 193 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC139792.2-201ENST00000624218 587 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC010608.3-201ENST00000625048 527 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM38O00635 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 SAMMSON-209ENST00000641222 1100 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 GTF2H2B-203ENST00000508065 1432 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AL590763.1-201ENST00000398297 1545 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 AC053481.2-202ENST00000582394 1500 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM38O00635 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM38O00635 RNA5SP187-201ENST00000384400 119 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 MIR1286-201ENST00000408112 78 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AC113412.1-201ENST00000425840 504 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 Z83846.1-201ENST00000446798 265 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 GTF2IP12-201ENST00000456547 356 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 RN7SL610P-201ENST00000463845 291 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM38O00635 AC069306.1-201ENST00000507006 843 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 GAPDHP62-201ENST00000515313 990 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 RNA5SP92-201ENST00000516437 110 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM38O00635 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 AP002906.1-201ENST00000603405 233 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 FRG1HP-204ENST00000617940 757 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AL512427.1-201ENST00000618593 349 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 MIR6730-201ENST00000622213 67 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AC079416.3-201ENST00000624479 549 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 AL390318.1-201ENST00000624564 687 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM38O00635 AL513185.3-201ENST00000433335 1300 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 VN2R3P-201ENST00000422626 1412 ntBASIC5.62□□□□□ -1.51
TRIM38O00635 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM38O00635 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM38O00635 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 RNA5SP131-201ENST00000365452 119 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 ANAPC10P1-201ENST00000395991 556 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC096533.1-201ENST00000411645 353 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 RPL35AP24-201ENST00000413846 330 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 AC097063.1-201ENST00000426714 1797 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 NANOGP4-201ENST00000427230 913 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 PTMAP6-201ENST00000439110 327 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC022431.1-201ENST00000450941 438 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM38O00635 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC100832.1-201ENST00000471945 383 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 RN7SL727P-201ENST00000482164 296 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC021146.5-201ENST00000503544 545 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms