Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP004607.2-201ENST00000533949 322 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXN3O00409 AL390334.1-201ENST00000556395 450 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXN3O00409 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 MIR3614-201ENST00000581261 86 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 VN1R87P-201ENST00000596706 487 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 FO393422.1-201ENST00000603908 708 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC005377.1-201ENST00000605126 456 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC007342.8-201ENST00000623278 678 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC139713.2-210ENST00000641741 992 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 RNA5SP241-201ENST00000391326 114 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 ZNF602P-201ENST00000405929 924 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AP000357.1-201ENST00000409926 1165 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AC092638.1-201ENST00000411966 1275 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 SDHDP6-201ENST00000414693 480 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 RPL7AP49-201ENST00000429522 581 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AL591438.1-201ENST00000433508 581 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 AC073909.1-201ENST00000447112 999 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 RPL31P15-201ENST00000449770 338 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 RPS27AP2-201ENST00000457576 465 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC015720.2-201ENST00000567709 334 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC015982.1-201ENST00000608113 465 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC127024.6-201ENST00000621598 424 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXN3O00409 AC097655.1-201ENST00000635075 318 ntBASIC5.79□□□□□ -1.48
FOXN3O00409 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXN3O00409 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXN3O00409 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXN3O00409 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 TMSB4XP4-201ENST00000323496 618 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 SNORA62.2-201ENST00000364672 152 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FOXN3O00409 AL031985.1-201ENST00000392713 418 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 MCTS2P-201ENST00000394552 546 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 RPL7P27-201ENST00000403775 720 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC079809.1-201ENST00000415468 276 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 Z93019.1-201ENST00000416450 973 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 RPL12P17-201ENST00000432393 498 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 MTCYBP15-201ENST00000433123 1127 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms