Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 AL121894.2-201ENST00000602977 491 ntBASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 AC091076.1-201ENST00000610741 619 ntBASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 AL691432.2-201ENST00000607222 2038 ntBASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHAC2Q9Y5I4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 AC020907.5-201ENST00000624372 1936 ntBASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 AL512408.1-201ENST00000569378 2000 ntBASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 FAM86EP-206ENST00000510506 987 ntBASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHAC2Q9Y5I4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 KRT18P38-201ENST00000449496 1282 ntBASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 AL359075.1-203ENST00000462729 1002 ntBASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 AL137060.1-201ENST00000618151 2648 ntBASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
PCDHAC2Q9Y5I4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 AP003041.3-201ENST00000527151 707 ntBASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 LINC01238-205ENST00000567549 1107 ntBASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHAC2Q9Y5I4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 KRT8P45-201ENST00000414328 1447 ntBASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 TSPY17P-201ENST00000450329 467 ntBASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 AC092647.4-201ENST00000457211 535 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms