Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 AC133561.5-201ENST00000635547 218 ntBASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 AP003071.4-201ENST00000562276 1284 ntBASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA6Q9Y5G7 AC116562.4-201ENST00000641316 2276 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AC124283.5-201ENST00000624661 1809 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AC018445.3-201ENST00000624177 1945 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 HLA-G-202ENST00000376815 851 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 HLA-G-203ENST00000376818 1127 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AL355355.2-201ENST00000442321 338 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 CD177P1-201ENST00000606252 935 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 AC004264.1-201ENST00000608354 794 ntBASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA6Q9Y5G7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.77■□□□□ 0.59
PCDHGA6Q9Y5G7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 AC073195.1-201ENST00000607241 877 ntBASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA6Q9Y5G7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms