Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.52■■□□□ 1.68
SPG7Q9UQ90 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SPG7Q9UQ90 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.51■■□□□ 1.67
SPG7Q9UQ90 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 CA15P1-201ENST00000481698 905 ntBASIC25.51■■□□□ 1.67
SPG7Q9UQ90 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 AC091076.1-201ENST00000610741 619 ntBASIC25.51■■□□□ 1.67
SPG7Q9UQ90 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
SPG7Q9UQ90 FEM1AP1-201ENST00000431297 1995 ntBASIC25.51■■□□□ 1.67
SPG7Q9UQ90 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 AL512604.3-201ENST00000569583 964 ntBASIC25.5■■□□□ 1.67
SPG7Q9UQ90 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 AC020907.5-201ENST00000624372 1936 ntBASIC25.5■■□□□ 1.67
SPG7Q9UQ90 AL358472.4-201ENST00000633140 710 ntBASIC25.5■■□□□ 1.67
SPG7Q9UQ90 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
SPG7Q9UQ90 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 AL031133.1-201ENST00000406807 723 ntBASIC25.49■■□□□ 1.67
SPG7Q9UQ90 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 LINC01465-201ENST00000408887 1940 ntBASIC25.49■■□□□ 1.67
SPG7Q9UQ90 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPG7Q9UQ90 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.48■■□□□ 1.67
SPG7Q9UQ90 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 AC092647.4-201ENST00000457211 535 ntBASIC25.47■■□□□ 1.67
SPG7Q9UQ90 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 CKBP1-201ENST00000565489 1086 ntBASIC25.47■■□□□ 1.67
SPG7Q9UQ90 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms