Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CDK11AQ9UQ88 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 COPS8-203ENST00000409334 794 ntTSL 5 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 AC009947.2-201ENST00000444014 672 ntBASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 METTL23-204ENST00000586752 904 ntTSL 2 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CDK11AQ9UQ88 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 KRT8P41-201ENST00000533985 1514 ntBASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 FAM86EP-206ENST00000510506 987 ntBASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 GOLGA2P11-201ENST00000562660 1621 ntBASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDK11AQ9UQ88 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDK11AQ9UQ88 MOK-225ENST00000522867 1883 ntTSL 5 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 AC008622.2-201ENST00000617006 1229 ntBASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDK11AQ9UQ88 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 PCED1CP-201ENST00000419887 785 ntBASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 AP003041.3-201ENST00000527151 707 ntBASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 AC140113.3-201ENST00000605663 199 ntBASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 FEM1AP1-201ENST00000431297 1995 ntBASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CDK11AQ9UQ88 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 AL441883.1-201ENST00000566170 1045 ntBASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC30.14■■■□□ 2.42
CDK11AQ9UQ88 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.14■■■□□ 2.41
CDK11AQ9UQ88 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
CDK11AQ9UQ88 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CDK11AQ9UQ88 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms