Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 AC007952.6-201ENST00000573168 2673 ntBASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 AC003957.1-201ENST00000625108 2673 ntBASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 KRT16P5-201ENST00000455284 522 ntBASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 AC110285.5-201ENST00000611501 352 ntBASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGC3Q9UN70 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 AC104417.2-201ENST00000562989 1793 ntBASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC3Q9UN70 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC3Q9UN70 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PCDHGC3Q9UN70 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 AL032819.2-201ENST00000624543 2162 ntBASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGC3Q9UN70 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGC3Q9UN70 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms