Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 AP006587.1-201ENST00000534129 1502 ntBASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 AC239809.2-201ENST00000415381 517 ntBASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 AC098590.1-201ENST00000468126 897 ntBASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 RPPH1-201ENST00000516869 333 ntBASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 C1QBPP2-201ENST00000528754 825 ntBASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPARGC1AQ9UBK2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 AL359736.2-201ENST00000621992 437 ntBASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 NBPF21P-201ENST00000425093 1451 ntBASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPARGC1AQ9UBK2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 KRASP1-201ENST00000407852 552 ntBASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 GCSHP5-201ENST00000443090 522 ntBASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 YBX1P10-201ENST00000444752 975 ntBASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 AC110285.5-201ENST00000611501 352 ntBASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.27■□□□□ 0.84
PPARGC1AQ9UBK2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PPARGC1AQ9UBK2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.26■□□□□ 0.83
PPARGC1AQ9UBK2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms