Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TLR9Q9NR96 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TLR9Q9NR96 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TLR9Q9NR96 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 KRT8P8-201ENST00000434750 1448 ntBASIC20.71■□□□□ 0.91
TLR9Q9NR96 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 AL121956.5-201ENST00000625261 221 ntBASIC20.71■□□□□ 0.91
TLR9Q9NR96 AL031432.5-201ENST00000641059 760 ntBASIC20.71■□□□□ 0.91
TLR9Q9NR96 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TLR9Q9NR96 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TLR9Q9NR96 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 AL353719.1-201ENST00000566847 864 ntBASIC20.7■□□□□ 0.9
TLR9Q9NR96 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TLR9Q9NR96 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TLR9Q9NR96 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 PCED1CP-201ENST00000419887 785 ntBASIC20.69■□□□□ 0.9
TLR9Q9NR96 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 HOMER2P1-201ENST00000455653 964 ntBASIC20.69■□□□□ 0.9
TLR9Q9NR96 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.69■□□□□ 0.9
TLR9Q9NR96 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TLR9Q9NR96 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TLR9Q9NR96 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 FAM86EP-206ENST00000510506 987 ntBASIC20.68■□□□□ 0.9
TLR9Q9NR96 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 KRT126P-201ENST00000549467 1181 ntBASIC20.68■□□□□ 0.9
TLR9Q9NR96 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR9Q9NR96 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TLR9Q9NR96 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms