Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 NAPSB-206ENST00000562112 1266 ntBASIC20.24■□□□□ 0.83
RNF38Q9H0F5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 LINC01568-207ENST00000641790 1380 ntBASIC20.23■□□□□ 0.83
RNF38Q9H0F5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 AC097488.1-201ENST00000507834 756 ntBASIC20.23■□□□□ 0.83
RNF38Q9H0F5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF38Q9H0F5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 Z85996.1-201ENST00000494644 937 ntBASIC20.22■□□□□ 0.83
RNF38Q9H0F5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.22■□□□□ 0.83
RNF38Q9H0F5 DGCR10-201ENST00000609839 495 ntBASIC20.22■□□□□ 0.83
RNF38Q9H0F5 AC011298.2-201ENST00000617989 482 ntBASIC20.22■□□□□ 0.83
RNF38Q9H0F5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF38Q9H0F5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 MIR1224-201ENST00000408193 85 ntBASIC20.21■□□□□ 0.83
RNF38Q9H0F5 CRYGFP-201ENST00000418459 633 ntBASIC20.21■□□□□ 0.83
RNF38Q9H0F5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 AP000692.2-201ENST00000608391 879 ntBASIC20.21■□□□□ 0.83
RNF38Q9H0F5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 TCF3P1-201ENST00000423021 1937 ntBASIC20.21■□□□□ 0.83
RNF38Q9H0F5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
RNF38Q9H0F5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
RNF38Q9H0F5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 AC004951.3-201ENST00000418645 1148 ntBASIC20.2■□□□□ 0.82
RNF38Q9H0F5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 AC091390.4-202ENST00000476426 537 ntBASIC20.2■□□□□ 0.82
RNF38Q9H0F5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF38Q9H0F5 AP005242.2-201ENST00000580065 1175 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms