Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 C1QL1P1-201ENST00000568105 661 ntBASIC23.19■■□□□ 1.3
NBPF3Q9H094 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 CD177P1-201ENST00000606252 935 ntBASIC23.19■■□□□ 1.3
NBPF3Q9H094 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NBPF3Q9H094 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NBPF3Q9H094 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 ARMC10P1-201ENST00000313754 855 ntBASIC23.18■■□□□ 1.3
NBPF3Q9H094 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 AC113410.3-201ENST00000623366 203 ntBASIC23.18■■□□□ 1.3
NBPF3Q9H094 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NBPF3Q9H094 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF3Q9H094 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 AL355075.4-201ENST00000554988 638 ntBASIC23.17■■□□□ 1.3
NBPF3Q9H094 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
NBPF3Q9H094 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF3Q9H094 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF3Q9H094 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NBPF3Q9H094 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 HTR7P1-201ENST00000538670 1336 ntBASIC23.15■■□□□ 1.3
NBPF3Q9H094 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 TUBB8P6-201ENST00000436895 1288 ntBASIC23.15■■□□□ 1.3
NBPF3Q9H094 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 RARRES2P10-201ENST00000564312 460 ntBASIC23.15■■□□□ 1.3
NBPF3Q9H094 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF3Q9H094 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF3Q9H094 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.14■■□□□ 1.3
NBPF3Q9H094 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NBPF3Q9H094 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NBPF3Q9H094 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NBPF3Q9H094 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.14■■□□□ 1.29
NBPF3Q9H094 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms