Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 AC110285.5-201ENST00000611501 352 ntBASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 AL121829.2-201ENST00000620908 328 ntBASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCGF1Q9BSM1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCGF1Q9BSM1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AC099778.1-201ENST00000568593 1911 ntBASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCGF1Q9BSM1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms