Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 KRT18P35-201ENST00000510488 1269 ntBASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 AP000692.2-201ENST00000608391 879 ntBASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.05■■□□□ 1.28
CDK5RAP2Q96SN8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 AC128688.1-201ENST00000487626 519 ntBASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP2Q96SN8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDK5RAP2Q96SN8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 AC010203.1-204ENST00000548782 407 ntBASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 AC104417.2-201ENST00000562989 1793 ntBASIC23.02■■□□□ 1.28
CDK5RAP2Q96SN8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
CDK5RAP2Q96SN8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 AC008040.2-201ENST00000461049 708 ntBASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CDK5RAP2Q96SN8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AC022616.7-201ENST00000525383 220 ntBASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AL049597.2-201ENST00000565575 961 ntBASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AC112907.3-201ENST00000577781 2400 ntBASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 AC006011.2-201ENST00000621313 1158 ntBASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
CDK5RAP2Q96SN8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms