Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 AC073195.1-201ENST00000607241 877 ntBASIC15.16■□□□□ 0.02
DUX3Q96PT4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DUX3Q96PT4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX3Q96PT4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 TFP1-202ENST00000475455 1573 ntBASIC15.15■□□□□ 0.02
DUX3Q96PT4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 AC133561.5-201ENST00000635547 218 ntBASIC15.15■□□□□ 0.02
DUX3Q96PT4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 BX119927.1-201ENST00000636596 1552 ntBASIC15.15■□□□□ 0.02
DUX3Q96PT4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX3Q96PT4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX3Q96PT4 FEM1AP1-201ENST00000431297 1995 ntBASIC15.15■□□□□ 0.02
DUX3Q96PT4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms