Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 AP001271.2-201ENST00000624018 1556 ntBASIC18.4■□□□□ 0.54
COL21A1Q96P44 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SOX15-203ENST00000570788 1093 ntBASIC18.4■□□□□ 0.54
COL21A1Q96P44 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 AC006557.6-201ENST00000623071 864 ntBASIC18.4■□□□□ 0.54
COL21A1Q96P44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.4■□□□□ 0.54
COL21A1Q96P44 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL21A1Q96P44 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL21A1Q96P44 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 AC005332.7-201ENST00000614046 2005 ntBASIC18.39■□□□□ 0.53
COL21A1Q96P44 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COL21A1Q96P44 AC120498.9-201ENST00000339021 3867 ntBASIC18.39■□□□□ 0.53
COL21A1Q96P44 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL21A1Q96P44 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL21A1Q96P44 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
COL21A1Q96P44 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.37■□□□□ 0.53
COL21A1Q96P44 UNC93B4-201ENST00000505679 747 ntBASIC18.37■□□□□ 0.53
COL21A1Q96P44 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.37■□□□□ 0.53
COL21A1Q96P44 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL21A1Q96P44 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms