Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.89■□□□□ 0.77
CHFRQ96EP1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.88■□□□□ 0.77
CHFRQ96EP1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.88■□□□□ 0.77
CHFRQ96EP1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 AC116562.4-202ENST00000641738 218 ntBASIC19.88■□□□□ 0.77
CHFRQ96EP1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHFRQ96EP1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CHFRQ96EP1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.87■□□□□ 0.77
CHFRQ96EP1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.87■□□□□ 0.77
CHFRQ96EP1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHFRQ96EP1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.86■□□□□ 0.77
CHFRQ96EP1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHFRQ96EP1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHFRQ96EP1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHFRQ96EP1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 AL031133.1-201ENST00000406807 723 ntBASIC19.85■□□□□ 0.77
CHFRQ96EP1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 CCR12P-201ENST00000446203 998 ntBASIC19.85■□□□□ 0.77
CHFRQ96EP1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 YBX1P2-201ENST00000489612 999 ntBASIC19.85■□□□□ 0.77
CHFRQ96EP1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 AC010653.2-201ENST00000623505 997 ntBASIC19.85■□□□□ 0.77
CHFRQ96EP1 AL358472.4-201ENST00000633140 710 ntBASIC19.85■□□□□ 0.77
CHFRQ96EP1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHFRQ96EP1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
CHFRQ96EP1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHFRQ96EP1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.84■□□□□ 0.77
CHFRQ96EP1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms