Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 AC092720.2-201ENST00000602388 1665 ntBASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 AC006128.1-201ENST00000624704 1661 ntBASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 TMEM179-206ENST00000616017 1645 ntBASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNRNP40Q96DI7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 AC140113.3-201ENST00000605663 199 ntBASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 AC093458.2-201ENST00000623150 629 ntBASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRNP40Q96DI7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 AC007225.1-201ENST00000566331 1836 ntBASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRNP40Q96DI7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AL359075.1-203ENST00000462729 1002 ntBASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRNP40Q96DI7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 AL671277.2-201ENST00000458060 996 ntBASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 AL023973.1-201ENST00000624619 620 ntBASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 KRT8P8-201ENST00000434750 1448 ntBASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNRNP40Q96DI7 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms