Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC3Q92529 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 ESRRAP1-201ENST00000400596 1257 ntBASIC20.82■□□□□ 0.92
SHC3Q92529 KRT17P3-201ENST00000420566 1262 ntBASIC20.82■□□□□ 0.92
SHC3Q92529 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 TUBB8P6-201ENST00000436895 1288 ntBASIC20.82■□□□□ 0.92
SHC3Q92529 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC3Q92529 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC3Q92529 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.82■□□□□ 0.92
SHC3Q92529 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC3Q92529 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.81■□□□□ 0.92
SHC3Q92529 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SHC3Q92529 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHC3Q92529 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.81■□□□□ 0.92
SHC3Q92529 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHC3Q92529 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.81■□□□□ 0.92
SHC3Q92529 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHC3Q92529 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.81■□□□□ 0.92
SHC3Q92529 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.81■□□□□ 0.92
SHC3Q92529 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
SHC3Q92529 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.81■□□□□ 0.92
SHC3Q92529 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
SHC3Q92529 AC104417.2-201ENST00000562989 1793 ntBASIC20.81■□□□□ 0.92
SHC3Q92529 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SHC3Q92529 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.81■□□□□ 0.92
SHC3Q92529 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC3Q92529 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.8■□□□□ 0.92
SHC3Q92529 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
SHC3Q92529 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.8■□□□□ 0.92
SHC3Q92529 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.8■□□□□ 0.92
SHC3Q92529 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.8■□□□□ 0.92
SHC3Q92529 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.8■□□□□ 0.92
SHC3Q92529 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.8■□□□□ 0.92
SHC3Q92529 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.8■□□□□ 0.92
SHC3Q92529 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SHC3Q92529 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.8■□□□□ 0.92
SHC3Q92529 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
SHC3Q92529 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHC3Q92529 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SHC3Q92529 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHC3Q92529 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHC3Q92529 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SHC3Q92529 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHC3Q92529 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SHC3Q92529 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHC3Q92529 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.79■□□□□ 0.92
SHC3Q92529 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SHC3Q92529 NBPF21P-201ENST00000425093 1451 ntBASIC20.79■□□□□ 0.92
SHC3Q92529 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SHC3Q92529 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.79■□□□□ 0.92
SHC3Q92529 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.79■□□□□ 0.92
SHC3Q92529 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SHC3Q92529 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHC3Q92529 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
SHC3Q92529 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SHC3Q92529 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 BX323043.1-201ENST00000641006 1765 ntBASIC20.78■□□□□ 0.92
SHC3Q92529 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SHC3Q92529 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.78■□□□□ 0.92
SHC3Q92529 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.78■□□□□ 0.92
SHC3Q92529 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.78■□□□□ 0.92
SHC3Q92529 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms