Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF548Q8NEK5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 NIFKP9-201ENST00000419265 221 ntBASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 RBM17P1-201ENST00000453646 1190 ntBASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 AC010331.1-201ENST00000611423 582 ntBASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF548Q8NEK5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.39■□□□□ 0.7
ZNF548Q8NEK5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF548Q8NEK5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
ZNF548Q8NEK5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF548Q8NEK5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
ZNF548Q8NEK5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 KSR1P1-201ENST00000446298 240 ntBASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF548Q8NEK5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 UNC93B2-201ENST00000285383 730 ntBASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 RCN1P1-201ENST00000400413 996 ntBASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 AP006587.1-201ENST00000534129 1502 ntBASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 AP000525.1-201ENST00000608286 694 ntBASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF548Q8NEK5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 AC079598.2-202ENST00000546624 1451 ntBASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 KRT16P1-201ENST00000399124 1418 ntBASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF548Q8NEK5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF548Q8NEK5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF548Q8NEK5 AC116351.2-201ENST00000606540 1585 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms