Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 AC012313.10-201ENST00000623509 926 ntBASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 MFAP1P1-201ENST00000442257 1255 ntBASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 HLA-A-209ENST00000638375 975 ntBASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 TUBB8P6-201ENST00000436895 1288 ntBASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFAP43Q8NDM7 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.6■■■□□ 2.49
CFAP43Q8NDM7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CFAP43Q8NDM7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 AP000692.2-201ENST00000608391 879 ntBASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 AC116562.4-202ENST00000641738 218 ntBASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CFAP43Q8NDM7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 AC130371.2-201ENST00000619443 611 ntBASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC30.58■■■□□ 2.49
CFAP43Q8NDM7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC30.57■■■□□ 2.49
CFAP43Q8NDM7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 AC131212.4-201ENST00000623606 975 ntBASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFAP43Q8NDM7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 HOMER2P1-201ENST00000455653 964 ntBASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CFAP43Q8NDM7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 SLC25A1P2-201ENST00000430693 912 ntBASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 AL691432.3-201ENST00000621860 400 ntBASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFAP43Q8NDM7 KRT8P8-201ENST00000434750 1448 ntBASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms