Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SPDYE15P-201ENST00000424157 909 ntBASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 HCG4P8-203ENST00000443049 980 ntBASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 AC092647.4-201ENST00000457211 535 ntBASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 AC093458.2-201ENST00000623150 629 ntBASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.46■□□□□ 0.54
COL27A1Q8IZC6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.46■□□□□ 0.54
COL27A1Q8IZC6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.46■□□□□ 0.54
COL27A1Q8IZC6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.54
COL27A1Q8IZC6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COL27A1Q8IZC6 KRT8P11-201ENST00000409686 1436 ntBASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 KRT8P45-201ENST00000414328 1447 ntBASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 HYMAI.1-201ENST00000620949 238 ntBASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL27A1Q8IZC6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 IER3-202ENST00000376377 1350 ntBASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.44■□□□□ 0.54
COL27A1Q8IZC6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 STARP1-201ENST00000397973 869 ntBASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 VENTXP5-201ENST00000523979 775 ntBASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 NEK4P2-201ENST00000580004 1012 ntBASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
COL27A1Q8IZC6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 ZNF444P1-201ENST00000559497 298 ntBASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms