Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 AC145285.6-201ENST00000604632 637 ntBASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 DGCR10-201ENST00000609839 495 ntBASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 AC011298.2-201ENST00000617989 482 ntBASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
UBE3BQ7Z3V4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 RCN1P1-201ENST00000400413 996 ntBASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 NAPSB-206ENST00000562112 1266 ntBASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.36■■□□□ 1.49
UBE3BQ7Z3V4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 AC004951.3-201ENST00000418645 1148 ntBASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 AC097488.1-201ENST00000507834 756 ntBASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE3BQ7Z3V4 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 LINC01568-207ENST00000641790 1380 ntBASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.34■■□□□ 1.49
UBE3BQ7Z3V4 LINC01521-201ENST00000504184 1943 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 CRYGFP-201ENST00000418459 633 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AC091390.4-202ENST00000476426 537 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AP005242.2-201ENST00000580065 1175 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 AP000692.2-201ENST00000608391 879 ntBASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBE3BQ7Z3V4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
UBE3BQ7Z3V4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
UBE3BQ7Z3V4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
UBE3BQ7Z3V4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
UBE3BQ7Z3V4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBE3BQ7Z3V4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms