Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT40Q6A162 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.59■■□□□ 1.21
KRT40Q6A162 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT40Q6A162 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.59■■□□□ 1.21
KRT40Q6A162 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.59■■□□□ 1.21
KRT40Q6A162 AL121829.2-201ENST00000620908 328 ntBASIC22.59■■□□□ 1.21
KRT40Q6A162 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
KRT40Q6A162 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT40Q6A162 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT40Q6A162 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
KRT40Q6A162 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT40Q6A162 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT40Q6A162 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT40Q6A162 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT40Q6A162 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
KRT40Q6A162 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
KRT40Q6A162 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
KRT40Q6A162 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.58■■□□□ 1.21
KRT40Q6A162 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
KRT40Q6A162 C1QBPP2-201ENST00000528754 825 ntBASIC22.58■■□□□ 1.21
KRT40Q6A162 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.58■■□□□ 1.21
KRT40Q6A162 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
KRT40Q6A162 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT40Q6A162 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT40Q6A162 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT40Q6A162 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
KRT40Q6A162 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT40Q6A162 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT40Q6A162 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT40Q6A162 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT40Q6A162 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
KRT40Q6A162 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.57■■□□□ 1.2
KRT40Q6A162 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.57■■□□□ 1.2
KRT40Q6A162 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
KRT40Q6A162 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
KRT40Q6A162 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.57■■□□□ 1.2
KRT40Q6A162 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.57■■□□□ 1.2
KRT40Q6A162 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
KRT40Q6A162 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.57■■□□□ 1.2
KRT40Q6A162 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.57■■□□□ 1.2
KRT40Q6A162 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT40Q6A162 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
KRT40Q6A162 AP006587.1-201ENST00000534129 1502 ntBASIC22.57■■□□□ 1.2
KRT40Q6A162 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT40Q6A162 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.56■■□□□ 1.2
KRT40Q6A162 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT40Q6A162 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
KRT40Q6A162 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 POM121L13P-201ENST00000422362 380 ntBASIC22.56■■□□□ 1.2
KRT40Q6A162 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.56■■□□□ 1.2
KRT40Q6A162 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.56■■□□□ 1.2
KRT40Q6A162 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.56■■□□□ 1.2
KRT40Q6A162 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT40Q6A162 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT40Q6A162 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT40Q6A162 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT40Q6A162 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
KRT40Q6A162 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
KRT40Q6A162 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KRT40Q6A162 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.55■■□□□ 1.2
KRT40Q6A162 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
KRT40Q6A162 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
KRT40Q6A162 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.55■■□□□ 1.2
KRT40Q6A162 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.55■■□□□ 1.2
KRT40Q6A162 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.55■■□□□ 1.2
KRT40Q6A162 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KRT40Q6A162 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT40Q6A162 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms