Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KRT18P67-201ENST00000432816 1264 ntBASIC19.01■□□□□ 0.63
RIF1Q5UIP0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 AC116351.2-201ENST00000606540 1585 ntBASIC19.01■□□□□ 0.63
RIF1Q5UIP0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RIF1Q5UIP0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19■□□□□ 0.63
RIF1Q5UIP0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19■□□□□ 0.63
RIF1Q5UIP0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIF1Q5UIP0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIF1Q5UIP0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIF1Q5UIP0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19■□□□□ 0.63
RIF1Q5UIP0 AC055717.3-201ENST00000622967 595 ntBASIC19■□□□□ 0.63
RIF1Q5UIP0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RIF1Q5UIP0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 PGAM5P1-201ENST00000518923 814 ntBASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 AL353801.3-201ENST00000609898 542 ntBASIC18.99■□□□□ 0.63
RIF1Q5UIP0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIF1Q5UIP0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 AC034232.1-201ENST00000506026 1064 ntBASIC18.98■□□□□ 0.63
RIF1Q5UIP0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIF1Q5UIP0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.97■□□□□ 0.63
RIF1Q5UIP0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.97■□□□□ 0.63
RIF1Q5UIP0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms