Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA4AP68366 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBA4AP68366 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.26■□□□□ 0.51
TUBA4AP68366 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA4AP68366 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBA4AP68366 AC010536.3-201ENST00000620306 533 ntBASIC18.26■□□□□ 0.51
TUBA4AP68366 RARRES2P11-201ENST00000635158 484 ntBASIC18.26■□□□□ 0.51
TUBA4AP68366 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBA4AP68366 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBA4AP68366 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TUBA4AP68366 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA4AP68366 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA4AP68366 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBA4AP68366 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TUBA4AP68366 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA4AP68366 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBA4AP68366 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TUBA4AP68366 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBA4AP68366 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 AC090164.3-201ENST00000610780 2143 ntBASIC18.25■□□□□ 0.51
TUBA4AP68366 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TUBA4AP68366 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.25■□□□□ 0.51
TUBA4AP68366 CDCA4P2-201ENST00000441182 718 ntBASIC18.25■□□□□ 0.51
TUBA4AP68366 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.25■□□□□ 0.51
TUBA4AP68366 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBA4AP68366 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBA4AP68366 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.25■□□□□ 0.51
TUBA4AP68366 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TUBA4AP68366 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBA4AP68366 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBA4AP68366 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA4AP68366 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBA4AP68366 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TUBA4AP68366 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 AC090192.1-201ENST00000517740 490 ntBASIC18.24■□□□□ 0.51
TUBA4AP68366 DUX4L16-201ENST00000555130 1264 ntBASIC18.24■□□□□ 0.51
TUBA4AP68366 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
TUBA4AP68366 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBA4AP68366 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TUBA4AP68366 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA4AP68366 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TUBA4AP68366 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA4AP68366 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA4AP68366 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA4AP68366 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA4AP68366 BICD1-207ENST00000551848 1962 ntBASIC18.23■□□□□ 0.51
TUBA4AP68366 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA4AP68366 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA4AP68366 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.23■□□□□ 0.51
TUBA4AP68366 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA4AP68366 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA4AP68366 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.23■□□□□ 0.51
TUBA4AP68366 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TUBA4AP68366 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA4AP68366 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms