Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN12P56749 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN12P56749 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN12P56749 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 AL591742.1-201ENST00000604433 565 ntBASIC16.95■□□□□ 0.3
CLDN12P56749 AL139246.5-201ENST00000606645 996 ntBASIC16.95■□□□□ 0.3
CLDN12P56749 MYCNOS-205ENST00000641950 531 ntBASIC16.95■□□□□ 0.3
CLDN12P56749 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN12P56749 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN12P56749 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CLDN12P56749 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLDN12P56749 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 AC090340.1-201ENST00000620778 4980 ntBASIC16.94■□□□□ 0.3
CLDN12P56749 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN12P56749 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN12P56749 AC016405.3-201ENST00000607710 860 ntBASIC16.94■□□□□ 0.3
CLDN12P56749 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN12P56749 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 PHGDH-210ENST00000641115 1638 ntBASIC16.94■□□□□ 0.3
CLDN12P56749 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN12P56749 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN12P56749 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN12P56749 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN12P56749 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 AC006333.2-201ENST00000607957 2099 ntBASIC16.93■□□□□ 0.3
CLDN12P56749 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN12P56749 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN12P56749 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.93■□□□□ 0.3
CLDN12P56749 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN12P56749 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN12P56749 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN12P56749 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 KRT18P61-201ENST00000585825 1298 ntBASIC16.93■□□□□ 0.3
CLDN12P56749 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CLDN12P56749 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN12P56749 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN12P56749 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDN12P56749 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN12P56749 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.92■□□□□ 0.3
CLDN12P56749 YBX1P1-201ENST00000445822 960 ntBASIC16.92■□□□□ 0.3
CLDN12P56749 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN12P56749 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms