Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 AC004911.1-201ENST00000416316 871 ntBASIC12.36□□□□□ -0.43
UBE2AP49459 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.36□□□□□ -0.43
UBE2AP49459 AL355472.2-201ENST00000422958 438 ntBASIC12.36□□□□□ -0.43
UBE2AP49459 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2AP49459 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.36□□□□□ -0.43
UBE2AP49459 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.36□□□□□ -0.43
UBE2AP49459 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2AP49459 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2AP49459 AL031963.3-201ENST00000606441 850 ntBASIC12.36□□□□□ -0.43
UBE2AP49459 AC080038.1-201ENST00000611274 1154 ntBASIC12.36□□□□□ -0.43
UBE2AP49459 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2AP49459 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2AP49459 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
UBE2AP49459 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2AP49459 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2AP49459 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2AP49459 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.35□□□□□ -0.43
UBE2AP49459 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 KRT8P17-201ENST00000453110 1448 ntBASIC12.35□□□□□ -0.43
UBE2AP49459 AC010980.2-201ENST00000587099 1412 ntBASIC12.35□□□□□ -0.43
UBE2AP49459 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UBE2AP49459 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
UBE2AP49459 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2AP49459 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.34□□□□□ -0.43
UBE2AP49459 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms