Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.84■□□□□ 0.61
SLC6A12P48065 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A12P48065 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.84■□□□□ 0.61
SLC6A12P48065 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A12P48065 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SLC6A12P48065 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A12P48065 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A12P48065 AC104417.2-201ENST00000562989 1793 ntBASIC18.83■□□□□ 0.61
SLC6A12P48065 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SLC6A12P48065 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A12P48065 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A12P48065 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC6A12P48065 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SLC6A12P48065 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 ESRRAP1-201ENST00000400596 1257 ntBASIC18.83■□□□□ 0.6
SLC6A12P48065 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC6A12P48065 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC6A12P48065 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC6A12P48065 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A12P48065 NBPF21P-201ENST00000425093 1451 ntBASIC18.83■□□□□ 0.6
SLC6A12P48065 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC6A12P48065 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.82■□□□□ 0.6
SLC6A12P48065 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC6A12P48065 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SLC6A12P48065 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SLC6A12P48065 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC6A12P48065 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC6A12P48065 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A12P48065 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC6A12P48065 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC6A12P48065 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC6A12P48065 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A12P48065 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SLC6A12P48065 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A12P48065 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A12P48065 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A12P48065 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SLC6A12P48065 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 BX323043.1-201ENST00000641006 1765 ntBASIC18.81■□□□□ 0.6
SLC6A12P48065 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A12P48065 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC6A12P48065 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A12P48065 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A12P48065 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms