Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSKP43235 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
CTSKP43235 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSKP43235 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 YBX1P10-201ENST00000444752 975 ntBASIC19.4■□□□□ 0.7
CTSKP43235 B3GAT3P1-201ENST00000471720 806 ntBASIC19.4■□□□□ 0.7
CTSKP43235 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSKP43235 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.4■□□□□ 0.7
CTSKP43235 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
CTSKP43235 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTSKP43235 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTSKP43235 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSKP43235 DPP3P2-201ENST00000416030 1696 ntBASIC19.4■□□□□ 0.7
CTSKP43235 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSKP43235 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSKP43235 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSKP43235 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CTSKP43235 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTSKP43235 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSKP43235 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CTSKP43235 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.39■□□□□ 0.69
CTSKP43235 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTSKP43235 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSKP43235 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.39■□□□□ 0.69
CTSKP43235 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSKP43235 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTSKP43235 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSKP43235 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
CTSKP43235 FEM1AP1-201ENST00000431297 1995 ntBASIC19.38■□□□□ 0.69
CTSKP43235 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSKP43235 AC104076.2-201ENST00000448912 469 ntBASIC19.38■□□□□ 0.69
CTSKP43235 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.38■□□□□ 0.69
CTSKP43235 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.38■□□□□ 0.69
CTSKP43235 AC011506.1-201ENST00000474329 610 ntBASIC19.38■□□□□ 0.69
CTSKP43235 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSKP43235 KRT18P16-201ENST00000510337 1294 ntBASIC19.38■□□□□ 0.69
CTSKP43235 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTSKP43235 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.38■□□□□ 0.69
CTSKP43235 C2orf69P3-201ENST00000565542 1120 ntBASIC19.38■□□□□ 0.69
CTSKP43235 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 FP700111.2-201ENST00000619190 1892 ntBASIC19.38■□□□□ 0.69
CTSKP43235 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSKP43235 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSKP43235 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.37■□□□□ 0.69
CTSKP43235 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CTSKP43235 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.37■□□□□ 0.69
CTSKP43235 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CTSKP43235 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms