Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.55■□□□□ 0.88
RFC1P35251 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RFC1P35251 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.55■□□□□ 0.88
RFC1P35251 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFC1P35251 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RFC1P35251 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.54■□□□□ 0.88
RFC1P35251 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 AP006587.1-201ENST00000534129 1502 ntBASIC20.54■□□□□ 0.88
RFC1P35251 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.54■□□□□ 0.88
RFC1P35251 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 AC026366.1-201ENST00000488803 879 ntBASIC20.54■□□□□ 0.88
RFC1P35251 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.54■□□□□ 0.88
RFC1P35251 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.54■□□□□ 0.88
RFC1P35251 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFC1P35251 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.54■□□□□ 0.88
RFC1P35251 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.54■□□□□ 0.88
RFC1P35251 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC1P35251 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC1P35251 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.53■□□□□ 0.88
RFC1P35251 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC1P35251 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RFC1P35251 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.53■□□□□ 0.88
RFC1P35251 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC1P35251 Z82202.1-201ENST00000623446 1880 ntBASIC20.53■□□□□ 0.88
RFC1P35251 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC1P35251 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC1P35251 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RFC1P35251 AC005332.7-201ENST00000614046 2005 ntBASIC20.53■□□□□ 0.88
RFC1P35251 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC1P35251 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.52■□□□□ 0.88
RFC1P35251 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RFC1P35251 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.52■□□□□ 0.88
RFC1P35251 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RFC1P35251 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
RFC1P35251 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RFC1P35251 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.52■□□□□ 0.88
RFC1P35251 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
RFC1P35251 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.52■□□□□ 0.88
RFC1P35251 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.52■□□□□ 0.88
RFC1P35251 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.52■□□□□ 0.88
RFC1P35251 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC1P35251 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFC1P35251 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RFC1P35251 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
RFC1P35251 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RFC1P35251 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFC1P35251 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC1P35251 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC1P35251 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RFC1P35251 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC1P35251 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC1P35251 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC1P35251 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC1P35251 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC1P35251 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC1P35251 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.51■□□□□ 0.87
RFC1P35251 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms