Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 EP400NL-214ENST00000641289 2402 ntBASIC15.91■□□□□ 0.14
NF1P21359 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NF1P21359 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NF1P21359 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.9■□□□□ 0.14
NF1P21359 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 AC004980.1-204ENST00000429707 299 ntBASIC15.9■□□□□ 0.14
NF1P21359 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.9■□□□□ 0.14
NF1P21359 AL121912.1-201ENST00000603683 238 ntBASIC15.9■□□□□ 0.14
NF1P21359 AL390719.2-201ENST00000606993 987 ntBASIC15.9■□□□□ 0.14
NF1P21359 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.9■□□□□ 0.14
NF1P21359 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
NF1P21359 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.9■□□□□ 0.14
NF1P21359 AL645929.1-201ENST00000420084 975 ntBASIC15.9■□□□□ 0.14
NF1P21359 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.9■□□□□ 0.14
NF1P21359 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.9■□□□□ 0.14
NF1P21359 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NF1P21359 HLA-G-202ENST00000376815 851 ntBASIC15.9■□□□□ 0.14
NF1P21359 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NF1P21359 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.9■□□□□ 0.14
NF1P21359 TPSP2-201ENST00000561760 610 ntBASIC15.9■□□□□ 0.14
NF1P21359 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
NF1P21359 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
NF1P21359 AC112497.1-201ENST00000624824 639 ntBASIC15.9■□□□□ 0.14
NF1P21359 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.9■□□□□ 0.14
NF1P21359 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.89■□□□□ 0.14
NF1P21359 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.89■□□□□ 0.14
NF1P21359 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.89■□□□□ 0.13
NF1P21359 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.89■□□□□ 0.13
NF1P21359 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 STARP1-201ENST00000397973 869 ntBASIC15.89■□□□□ 0.13
NF1P21359 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.89■□□□□ 0.13
NF1P21359 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.89■□□□□ 0.13
NF1P21359 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.89■□□□□ 0.13
NF1P21359 TERC-201ENST00000602385 541 ntBASIC15.89■□□□□ 0.13
NF1P21359 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.89■□□□□ 0.13
NF1P21359 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.89■□□□□ 0.13
NF1P21359 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.89■□□□□ 0.13
NF1P21359 PMS2P7-201ENST00000506558 1336 ntBASIC15.89■□□□□ 0.13
NF1P21359 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.89■□□□□ 0.13
NF1P21359 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.89■□□□□ 0.13
NF1P21359 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NF1P21359 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NF1P21359 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.88■□□□□ 0.13
NF1P21359 AC239800.4-201ENST00000603712 296 ntBASIC15.88■□□□□ 0.13
NF1P21359 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.88■□□□□ 0.13
NF1P21359 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.88■□□□□ 0.13
NF1P21359 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.88■□□□□ 0.13
NF1P21359 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
NF1P21359 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NF1P21359 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.87■□□□□ 0.13
NF1P21359 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.87■□□□□ 0.13
NF1P21359 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.87■□□□□ 0.13
NF1P21359 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NF1P21359 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NF1P21359 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.87■□□□□ 0.13
NF1P21359 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
NF1P21359 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.87■□□□□ 0.13
NF1P21359 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NF1P21359 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms