Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLTAP09496 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLTAP09496 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLTAP09496 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CLTAP09496 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.34■■□□□ 1.01
CLTAP09496 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLTAP09496 AP001412.1-201ENST00000608405 714 ntBASIC21.34■■□□□ 1.01
CLTAP09496 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.34■■□□□ 1.01
CLTAP09496 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLTAP09496 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.34■■□□□ 1.01
CLTAP09496 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CLTAP09496 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.34■■□□□ 1.01
CLTAP09496 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLTAP09496 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CLTAP09496 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.34■■□□□ 1.01
CLTAP09496 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CLTAP09496 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CLTAP09496 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 AL353807.1-201ENST00000427475 662 ntBASIC21.33■■□□□ 1.01
CLTAP09496 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.33■■□□□ 1.01
CLTAP09496 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLTAP09496 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CLTAP09496 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.33■■□□□ 1.01
CLTAP09496 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.33■■□□□ 1
CLTAP09496 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CLTAP09496 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CLTAP09496 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLTAP09496 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.32■■□□□ 1
CLTAP09496 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CLTAP09496 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.32■■□□□ 1
CLTAP09496 TUBB8P6-201ENST00000436895 1288 ntBASIC21.32■■□□□ 1
CLTAP09496 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.32■■□□□ 1
CLTAP09496 AF186192.3-201ENST00000583427 947 ntBASIC21.32■■□□□ 1
CLTAP09496 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.32■■□□□ 1
CLTAP09496 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.32■■□□□ 1
CLTAP09496 TMEM179-206ENST00000616017 1645 ntBASIC21.32■■□□□ 1
CLTAP09496 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLTAP09496 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CLTAP09496 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CLTAP09496 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.32■■□□□ 1
CLTAP09496 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.31■■□□□ 1
CLTAP09496 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.31■■□□□ 1
CLTAP09496 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CLTAP09496 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.31■■□□□ 1
CLTAP09496 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.31■■□□□ 1
CLTAP09496 AL049637.2-201ENST00000641778 930 ntBASIC21.31■■□□□ 1
CLTAP09496 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLTAP09496 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLTAP09496 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.31■■□□□ 1
CLTAP09496 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.3■■□□□ 1
CLTAP09496 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.3■■□□□ 1
CLTAP09496 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.3■■□□□ 1
CLTAP09496 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.3■■□□□ 1
CLTAP09496 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CLTAP09496 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.3■■□□□ 1
CLTAP09496 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.3■■□□□ 1
CLTAP09496 AL353708.3-201ENST00000610272 989 ntBASIC21.3■■□□□ 1
CLTAP09496 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CLTAP09496 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.3■■□□□ 1
CLTAP09496 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLTAP09496 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CLTAP09496 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms